API reference ============= Library entry point ------------------- .. automodule:: arda.adapter :members: :undoc-members: :show-inheritance: Runtime annotation ------------------ .. automodule:: arda.annotate.mapper :members: :undoc-members: :show-inheritance: .. automodule:: arda.annotate.transfer :members: :undoc-members: :show-inheritance: .. automodule:: arda.annotate.reference :members: :undoc-members: :show-inheritance: .. automodule:: arda.annotate.io :members: :undoc-members: :show-inheritance: Reference build --------------- .. automodule:: arda.refbuild.build :members: :undoc-members: :show-inheritance: .. automodule:: arda.refbuild.combinations :members: :undoc-members: :show-inheritance: .. automodule:: arda.refbuild.translate :members: :undoc-members: :show-inheritance: .. automodule:: arda.refbuild.imgt :members: :undoc-members: :show-inheritance: External tool wrappers ---------------------- .. automodule:: arda.mmseqs :members: :undoc-members: :show-inheritance: .. automodule:: arda.igblast :members: :undoc-members: :show-inheritance: