Python Module Index t t tcren tcren.analysis tcren.annotation.arda_adapter tcren.annotation.cgene tcren.annotation.chains tcren.binder tcren.clashes tcren.cli tcren.cohort tcren.contact_types tcren.contactmap tcren.contacts.definitions tcren.contacts.geometry tcren.contacts.table tcren.cpl tcren.ddg tcren.geometry tcren.mechanics tcren.mhc.domains tcren.mhc.imgt tcren.mhc.linker tcren.mhc.mapper tcren.mhc.pseudo tcren.mhc.reference tcren.mhc.regions tcren.oracle tcren.orient.align tcren.orient.chains tcren.orient.docking tcren.orient.exceptions tcren.orient.frame tcren.orient.graft tcren.orient.pipeline tcren.orient.superimpose tcren.orient.tcrdock_geometry tcren.paper.bootstrap tcren.paper.helpers tcren.paths tcren.pipeline tcren.potential.derive tcren.potential.model tcren.potential.redundancy tcren.project2d.frame tcren.project2d.pockets tcren.project2d.tables tcren.recent tcren.recognition tcren.refine tcren.refine.anchors tcren.refine.engines.base tcren.refine.engines.ccd tcren.refine.engines.dope tcren.refine.engines.openmm_engine tcren.refine.engines.promod3_engine tcren.refine.interface tcren.refine.model tcren.refine.oracle_flexpep tcren.refine.register tcren.refine.rmsd tcren.refine.substitute tcren.scoring tcren.scoring_rank tcren.shuffle tcren.stability tcren.structure.io tcren.structure.model tcren.viz.palette tcren.viz.pocket3d tcren.viz.pymol tcren.viz.svg2d